#include <FitsNTuple.h>
Inheritance diagram for FitsNTuple:


Definition at line 28 of file FitsNTuple.h.
Public Types | |
| typedef void(hippodraw::Observer::* | Action )(const Observable *) |
| The member function of the Observer that is called. | |
| typedef std::list< hippodraw::Observer * > | ObserverList_t |
| The type of STL container to maintain list of Observer objects. | |
Public Member Functions | |
| int | addColumn (const std::string &label, const std::vector< double > &column) |
| Adds a column to the end of the FitsNTuple. | |
| void | addObserver (hippodraw::Observer *) |
| Adds an Observer to the Observer list. | |
| virtual void | addRow (const std::vector< double > &row) |
| Raises an assertion as the contained FITS file should not be changed. | |
| virtual void | clear () |
| Clears the data cache; doesn't not modify the contained fits file. | |
| unsigned int | columns () const |
| Returns the number of columns or data arrays available from this DataSource. | |
| virtual void | copy (const DataSource &) |
| Raises exception because with this release, copying the fits table is not supported. | |
| virtual bool | empty () const |
Returns true, if FitsNTuple is empty, i.e. | |
| virtual bool | fillRange (unsigned int column, Range &) const |
| Fills the Range object from data indexed by column. | |
| FitsNTuple (FitsFile *file) | |
| A constructor with a FitsFile as argument. | |
| virtual const std::vector< double > & | getColumn (unsigned int column) const |
| Returns the data in the column with index column. | |
| virtual const std::vector< double > & | getColumn (const std::string &name) const |
| Returns the data in the column with label name. | |
| const FitsFile * | getFile () const |
| Returns the FITS file used to create this object. | |
| virtual const std::string & | getLabelAt (unsigned int index) const |
| Returns the label for the column at index index. | |
| virtual const std::vector< std::string > & | getLabels () const |
| Returns the list of available labels. | |
| const std::string & | getName () const |
| Returns the name of the ntuple. | |
| const ObserverList_t & | getObservers () const |
| Returns the list of observers. | |
| unsigned int | getRank () const |
| Returns the rank of the data source. | |
| virtual const std::vector< double > & | getRow (unsigned int) const =0 |
| Returns a const reference to slice along the axis known as a row. | |
| virtual const std::vector< double > & | getRow (unsigned int index) const |
| Returns a const reference to slice along the axis known as a row. | |
| const std::vector< unsigned int > & | getShape () const |
| Returns the shape of the data elements. | |
| virtual int | indexOf (const std::string &label) const |
| Returns the index of the column whose label is label. | |
| virtual unsigned int | indexOfMaxElement (unsigned int index) const |
| Returns row index of the maximum element in a column for the given column. | |
| virtual unsigned int | indexOfMinElement (unsigned int index) const |
| Returns row index of the minimum element in a column for the given column. | |
| virtual bool | isMultiDimensional (const std::string &column) const |
| Answers if rows of column are composed of the multidimensional data. | |
| bool | isNull () const |
Returns true if the receiving objects is a null object. | |
| bool | isValidLabel (const std::string &label) const |
Returns true if label is a valid label for a column in the DataSource. | |
| virtual void | notifyObservers () const |
| Notifies observers. | |
| virtual double | operator[] (std::vector< unsigned int > &indices) const |
| Raises assertion as this method is not yet implemented. | |
| void | removeObserver (hippodraw::Observer *) |
| Removes an Observer from the Observer list. | |
| void | replaceColumn (const std::string &label, const std::vector< double > &data) |
| Replaces the data in column labeled label. | |
| void | replaceColumn (unsigned int index, const std::vector< double > &data) |
| Replaces the data in column index. | |
| virtual void | reserve (unsigned int count) |
| Raises assertion as the contained FITS file should not be changed. | |
| virtual unsigned int | rows () const |
| Returns the size of the slice for the next to last dimension. | |
| virtual bool | setLabelAt (const std::string &s, unsigned int index) |
| Changes the label of a data column to s. | |
| virtual void | setLabels (const std::vector< std::string > &v) |
| Assigns the label to each column from the vector of strings @ v. | |
| void | setName (const std::string &name) |
| Sets the name of the ntuple. | |
| virtual bool | setReleventIndex (const std::string &column, const std::vector< unsigned int > &index) |
| In case we are dealing with multidimensional data in rows of this column we would like to deal with on one entry of this multidimensional data. | |
| virtual void | setShape (std::vector< unsigned int > &shape) |
| Sets the shape of the data elements. | |
| void | setTitle (const std::string &title) |
| Sets the title of the ntuple to title. | |
| virtual double | sum (unsigned int column) const |
| Returns the sum of all the elements in the sequence of column column. | |
| virtual void | throwIfInvalidLabel (const std::string &label) const |
| Throws a DataSourceException object if label is not a valid label for this DataSource. | |
| void | throwIfInvalidRowSize (const std::vector< double > &row) |
| Throws a DataSourceException if the size of the row is not equal to the number of columns, otherwise does nothing. | |
| const std::string & | title () const |
| Returns a const reference to the title of the ntuple. | |
| virtual double | valueAt (unsigned int row, unsigned int column) const |
| Returns the value in the table in position given by the row and column indexes. | |
| virtual | ~FitsNTuple () |
| The destructor. | |
Protected Member Functions | |
| virtual void | addLabel (const std::string &label) |
| Adds a new label for a column. | |
| virtual void | copyPrivate (const DataSource &other) |
| Copies the contents of the other DataSource. | |
| bool | isValidColumn (unsigned int index) const |
Returns true if index is valid, otherwise throws a DataSourceException. | |
| void | notifyObservers (Action action) const |
| An internal method to iterate over all observers and to send the message action. | |
Protected Attributes | |
| std::vector< double > | m_array |
| A temporary array that can be returned by const reference. | |
| std::vector< unsigned int > | m_shape |
| The shape of the data. | |
Private Member Functions | |
| int | fillDataCache (unsigned int column) |
| Fills the data cache for column column. | |
| FitsNTuple () | |
| The default constructor. | |
| void | initColumns () |
| Initializes the columns of the NTuple. | |
Private Attributes | |
| std::vector< std::vector< double > * > | m_data |
| The numarray objects that contains the data. | |
| FitsFile * | m_file |
| The FitsFile used for this ntuple. | |
| int | m_hdu_num |
| The HDU number used for this ntuple. | |
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The member function of the Observer that is called.
Definition at line 83 of file Observable.h. |
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The type of STL container to maintain list of Observer objects.
Definition at line 46 of file Observable.h. |
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The default constructor.
Definition at line 33 of file FitsNTuple.cxx. |
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A constructor with a FitsFile as argument.
Definition at line 24 of file FitsNTuple.cxx. References initColumns(), m_file, and m_hdu_num. |
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The destructor.
Definition at line 39 of file FitsNTuple.cxx. |
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Adds a column to the end of the FitsNTuple. If the size of the input array is the same as the size of the existing columns adds input array to then end of the FitsNTuple . Gives the column the label label. Returns the index of the newly created column. If the size of the input array differs from the size of existing columns or if the label already exists, then throws a DataSourceException object. Definition at line 186 of file FitsNTuple.cxx. References DataSource::addLabel(), DataSource::indexOf(), m_data, and rows(). Referenced by hippodraw::Python::export_FitsNTuple(), and initColumns(). |
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Adds a new label for a column.
Definition at line 150 of file DataSource.cxx. References DataSource::m_labels. Referenced by NumArrayTuple::addColumn(), NTuple::addColumn(), ListTuple::addColumn(), RootNTuple::addColumn(), and addColumn(). |
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Adds an Observer to the Observer list.
Definition at line 49 of file Observable.cxx. References Observable::m_list. Referenced by CutPlotter::addCutTarget(), XyPlotter::addDataRep(), FunctionRep::FunctionRep(), BinningProjector::normalizeTo(), DataRepController::setAxisBindings(), DisplayController::setNTuple(), CutPlotter::setNTuple(), and TextPlotter::setParentDataRep(). |
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Raises an assertion as the contained FITS file should not be changed.
Implements DataSource. Definition at line 128 of file FitsNTuple.cxx. |
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Clears the data cache; doesn't not modify the contained fits file.
Implements DataSource. Definition at line 101 of file FitsNTuple.cxx. References m_data. |
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Raises exception because with this release, copying the fits table is not supported.
Definition at line 45 of file FitsNTuple.cxx. |
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Copies the contents of the other DataSource. For use by derived classes only. Definition at line 110 of file DataSource.cxx. References DataSource::m_ds_name, DataSource::m_is_null, DataSource::m_labels, DataSource::m_shape, and DataSource::m_title. Referenced by RTuple::copy(), and NTuple::copy(). |
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Returns has no data. Implements DataSource. Definition at line 121 of file FitsNTuple.cxx. References rows(). |
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Fills the data cache for column column. Returns the cfitsio status variable. Definition at line 88 of file FitsNTuple.cxx. References m_data, m_file, rows(), and num_util::size(). Referenced by fillRange(), and valueAt(). |
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Fills the Range object from data indexed by column.
Returns Reimplemented from DataSource. Definition at line 169 of file FitsNTuple.cxx. References fillDataCache(), m_data, and Range::setRange(). |
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Returns the data in the column with index column.
Reimplemented in NTuple, RootNTuple, QtRootNTuple, and RootNTuple. Definition at line 221 of file DataSource.cxx. References DataSource::isValidColumn(), DataSource::m_array, DataSource::rows(), num_util::size(), and DataSource::valueAt(). |
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Returns the data in the column with label name.
Reimplemented in NTuple, RootNTuple, QtRootNTuple, and RootNTuple. Definition at line 236 of file DataSource.cxx. References DataSource::indexOf(). Referenced by PyDataSource::columnAsNumArray(), NTupleXML::createChildren2D(), hippodraw::Python::export_DataSource(), and PyDataSource::getColumn(). |
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Returns the FITS file used to create this object.
Definition at line 52 of file FitsNTuple.cxx. References m_file. Referenced by FitsController::checkForImage(). |
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Returns the label for the column at index index. Returns the label for the column at index index, or throws a DataSourceException if index is out of range. Definition at line 175 of file DataSource.cxx. References DataSource::isNull(), DataSource::m_labels, and DataSource::title(). Referenced by NTupleXML::createChildren2D(), hippodraw::Python::export_ListTuple(), hippodraw::Python::export_NTuple(), hippodraw::Python::export_NumArrayTuple(), NTupleProjector::getAxisBindings(), NTupleProjector::getXLabel(), NTupleProjector::getYLabel(), Map1Projector::getYLabel(), Profile2DProjector::getZLabel(), MapMatrixProjector::getZLabel(), and Map3Projector::getZLabel(). |
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Returns the list of available labels.
Reimplemented in QtRootNTuple. Definition at line 168 of file DataSource.cxx. References DataSource::m_labels. Referenced by Inspector::availPlotTypesActivated(), hippodraw::Python::export_DataSource(), DisplayController::getDataSourceLabels(), QtRootNTuple::getLabels(), PyDataSource::getLabels(), NTupleProjector::getNTupleAfterCuts(), PyDataSource::replaceColumn(), RootNTuple::smartExpandRootNTuple(), Inspector::updateCutVarGroupBox(), and NTupleController::writeNTupleToFile(). |
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Returns the name of the ntuple.
Definition at line 132 of file DataSource.cxx. References DataSource::m_ds_name. Referenced by HiNTupleXML::createElement(), NTupleProjector::getNTupleName(), DataSourceController::registerNTuple(), NTupleController::saveNTuples(), and NTupleXML::setAttributes(). |
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Returns the list of observers.
Definition at line 57 of file Observable.cxx. References Observable::m_list. |
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Returns the rank of the data source. Returns the number of axes of the data source, i.e the rank. Reimplemented from DataSource. Definition at line 278 of file FitsNTuple.cxx. References DataSource::m_shape. |
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Returns a const reference to slice along the axis known as a row.
Referenced by RTuple::copy(), NTuple::copy(), and NTupleController::writeNTupleToFile(). |
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Returns a const reference to slice along the axis known as a row.
Definition at line 156 of file FitsNTuple.cxx. References DataSource::m_array, m_data, num_util::size(), and valueAt(). |
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Returns the shape of the data elements.
Reimplemented from DataSource. Definition at line 271 of file FitsNTuple.cxx. References DataSource::m_shape. |
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Returns the index of the column whose label is label. Returns the index of the data column whose label is label, or -1 if label does not exist. Definition at line 189 of file DataSource.cxx. References std::find(), and DataSource::m_labels. Referenced by NumArrayTuple::addColumn(), NTuple::addColumn(), ListTuple::addColumn(), RootNTuple::addColumn(), addColumn(), NTuple::getColumn(), RootNTuple::getColumn(), DataSource::getColumn(), NumArrayTuple::getNumArray(), RootNTuple::getTBranch(), NTupleProjector::indexOf(), RootNTuple::isMultiDimensional(), NumArrayTuple::replaceColumn(), NTuple::replaceColumn(), ListTuple::replaceColumn(), RootNTuple::replaceColumn(), replaceColumn(), RootNTuple::rowDataDimSize(), NTupleProjector::setAxisBinding(), RootNTuple::setReleventIndex(), RootNTuple::smartExpandRootNTuple(), and QtRootNTuple::valueAt(). |
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Returns row index of the maximum element in a column for the given column.
Reimplemented in NTuple. Definition at line 377 of file DataSource.cxx. References DataSource::columns(), DataSource::rows(), num_util::size(), and DataSource::valueAt(). |
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Returns row index of the minimum element in a column for the given column.
Reimplemented in NTuple. Definition at line 398 of file DataSource.cxx. References DataSource::columns(), DataSource::rows(), num_util::size(), and DataSource::valueAt(). |
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Initializes the columns of the NTuple.
Definition at line 59 of file FitsNTuple.cxx. References addColumn(), m_file, and num_util::size(). Referenced by FitsNTuple(). |
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Answers if rows of column are composed of the multidimensional data.
Reimplemented in RootNTuple, QtRootNTuple, and RootNTuple. Definition at line 359 of file DataSource.cxx. |
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Returns
Definition at line 121 of file DataSource.cxx. References DataSource::m_is_null. Referenced by ProfileProjector::execute(), Profile2DProjector::execute(), DataSource::getLabelAt(), NTupleProjector::NTupleProjector(), NTupleProjector::setNTuple(), and NTupleProjector::~NTupleProjector(). |
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Returns
Definition at line 208 of file DataSource.cxx. References DataSource::columns(), and num_util::size(). Referenced by NTuple::getColumn(), and DataSource::getColumn(). |
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Returns
The search is case sensitive. If the label is not found, returns Definition at line 250 of file DataSource.cxx. References std::find(), and DataSource::m_labels. Referenced by DataSource::throwIfInvalidLabel(). |
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An internal method to iterate over all observers and to send the message action.
Definition at line 69 of file Observable.cxx. References std::bind2nd(), std::for_each(), Observable::m_list, and std::mem_fun(). |
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Notifies observers.
Reimplemented from Observable. Definition at line 74 of file FitsNTuple.cxx. References Observable::notifyObservers(). Referenced by replaceColumn(). |
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Raises assertion as this method is not yet implemented.
Implements DataSource. Definition at line 135 of file FitsNTuple.cxx. |
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Removes an Observer from the Observer list.
Definition at line 63 of file Observable.cxx. References Observable::m_list. Referenced by BinningProjector::normalizeTo(), CutPlotter::removeFromTarget(), DisplayController::removeTextObservers(), NTupleProjector::setNTuple(), FunctionRep::willDelete(), FunctionRep::~FunctionRep(), and NTupleProjector::~NTupleProjector(). |
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Replaces the data in column labeled label. If the label is valid and if the size of data is the same as existing columns, then replaces the specified column with a copy of data in data. If the label is not valid or the sizes differ, then throws a DataSourceException. In neither case is the FITS file modified. Definition at line 249 of file FitsNTuple.cxx. References DataSource::indexOf(), and replaceColumn(). |
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Replaces the data in column index. If index is in a valid range and if the size of data is the same as existing columns, then replaces the specified column with a copy of data in data. If index is not a valid range or the sizes differ, then throws a DataSourceException. In neither case is the FITS file modified. Definition at line 224 of file FitsNTuple.cxx. References DataSource::columns(), std::copy(), m_data, notifyObservers(), rows(), and num_util::size(). Referenced by hippodraw::Python::export_FitsNTuple(), and replaceColumn(). |
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Raises assertion as the contained FITS file should not be changed.
Implements DataSource. Definition at line 114 of file FitsNTuple.cxx. |
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Returns the size of the slice for the next to last dimension.
Implements DataSource. Definition at line 81 of file FitsNTuple.cxx. References m_file. Referenced by addColumn(), empty(), fillDataCache(), and replaceColumn(). |
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Changes the label of a data column to s.
Definition at line 157 of file DataSource.cxx. References DataSource::m_labels, and Observable::notifyObservers(). |
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Assigns the label to each column from the vector of strings @ v.
Reimplemented in NTuple. Definition at line 289 of file DataSource.cxx. References DataSource::m_labels, and Observable::notifyObservers(). Referenced by hippodraw::Python::export_ListTuple(), hippodraw::Python::export_NumArrayTuple(), RTuple::RTuple(), and NTuple::setLabels(). |
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Sets the name of the ntuple.
Definition at line 126 of file DataSource.cxx. References DataSource::m_ds_name, and Observable::notifyObservers(). Referenced by NTupleController::createNTuple(), hippodraw::Python::export_DataSource(), PyDataSource::registerNTuple(), DataSourceController::registerNTuple(), and PyDataSource::setName(). |
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In case we are dealing with multidimensional data in rows of this column we would like to deal with on one entry of this multidimensional data. So here we set index of this relevant entry. Reimplemented in RootNTuple, and RootNTuple. Definition at line 366 of file DataSource.cxx. |
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Sets the shape of the data elements. Sets the shape data elements from the vector shape. The rank is given by the size of the vector. A rank of 2 correspond to table. If the total number of elements in the FitsNTuple is not equal to the product of the shape, then an assertion is raised. Reimplemented from DataSource. Definition at line 258 of file FitsNTuple.cxx. References DataSource::m_shape, and num_util::size(). |
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Sets the title of the ntuple to title.
Definition at line 142 of file DataSource.cxx. References DataSource::m_title, and Observable::notifyObservers(). Referenced by hippodraw::Python::export_DataSource(), NTupleController::readAsciiNTuple(), and PyDataSource::setTitle(). |
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Returns the sum of all the elements in the sequence of column column.
Reimplemented in NTuple. Definition at line 419 of file DataSource.cxx. References DataSource::columns(), DataSource::rows(), num_util::size(), and DataSource::valueAt(). |
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Throws a DataSourceException object if label is not a valid label for this DataSource. The exception object contains a message that the label is invalid. Derived classes may over-ride this method with more information on why the label is invalid. Definition at line 264 of file DataSource.cxx. References DataSource::isValidLabel(). Referenced by NTuple::getColumn(), RootNTuple::getColumn(), and QtRootNTuple::valueAt(). |
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Throws a DataSourceException if the size of the row is not equal to the number of columns, otherwise does nothing.
Definition at line 277 of file DataSource.cxx. References DataSource::columns(), and num_util::size(). Referenced by RTuple::addRow(), NTuple::addRow(), and NTuple::replaceRow(). |
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Returns a const reference to the title of the ntuple.
Definition at line 137 of file DataSource.cxx. References DataSource::m_title. Referenced by hippodraw::Python::export_DataSource(), DataSource::getLabelAt(), PyDataSource::getTitle(), NTupleProjector::getTitle(), and NTupleController::writeNTupleToFile(). |
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Returns the value in the table in position given by the row and column indexes.
Implements DataSource. Definition at line 143 of file FitsNTuple.cxx. References fillDataCache(), and m_data. Referenced by getRow(). |
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A temporary array that can be returned by const reference.
Definition at line 81 of file DataSource.h. Referenced by DataSource::getColumn(), RootNTuple::getRow(), and getRow(). |
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The numarray objects that contains the data.
Definition at line 35 of file FitsNTuple.h. Referenced by addColumn(), clear(), fillDataCache(), fillRange(), getRow(), replaceColumn(), and valueAt(). |
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The FitsFile used for this ntuple.
Definition at line 39 of file FitsNTuple.h. Referenced by fillDataCache(), FitsNTuple(), getFile(), initColumns(), and rows(). |
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The HDU number used for this ntuple. The first (primary) HDU is = 1. Definition at line 44 of file FitsNTuple.h. Referenced by FitsNTuple(). |
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The shape of the data. The elements the DataSource can have an arbitrary number of dimensions, called rank. An ordinary table has rank of 2 and the shape is number of columns and number of rows. That is m_shape[0] is number of columns and m_share[1] is number of rows. Definition at line 89 of file DataSource.h. Referenced by DataSource::copyPrivate(), NumArrayTuple::getRank(), ListTuple::getRank(), RootNTuple::getRank(), getRank(), DataSource::getRank(), NumArrayTuple::getShape(), ListTuple::getShape(), RootNTuple::getShape(), getShape(), DataSource::getShape(), RTuple::operator[](), NTuple::operator[](), |